BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F07LP1|AL425155
(1029 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1237 1944 0.0
>3x_Contig1237
Length = 6632
Score = 1944 bits (980), Expect = 0.0
Identities = 1025/1033 (99%), Gaps = 7/1033 (0%)
Strand = Plus / Minus
Query: 1 aatccatcaagaccatttactgaattgatcacatcgttctgtctcatttgtggtggtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2903 aatccatcaagaccatttactgaattgatcacatcgttctgtctcatttgtggtggtttg 2844
Query: 61 gtatttatggaatctacagatcaaatcgttgaagcgatggaatacagaggatttacccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843 gtatttatggaatctacagatcaaatcgttgaagcgatggaatacagaggatttacccca 2784
Query: 121 atgttcacgttcaacttaagtgttggatttgtcactatttttatggcttgggaaatggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2783 atgttcacgttcaacttaagtgttggatttgtcactatttttatggcttgggaaatggcc 2724
Query: 181 attttcatgtggaaagattggttgaagaatcgcatgaacaacaggtaaatttagaatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2723 attttcatgtggaaagattggttgaagaatcgcatgaacaacaggtaaatttagaatact 2664
Query: 241 caataactctacccaattcatgttttcaaggatgacaattgctaaagttttatacgcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2663 caataactctacccaattcatgttttcaaggatgacaattgctaaagttttatacgcaat 2604
Query: 301 tttttaactgggttttacttatacccagcagcaaacttaaaataaaaataattacatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603 tttttaactgggttttacttatacccagcagcaaacttaaaataaaaataattacatttt 2544
Query: 361 agaccgaccaatacgtcgaaccctatacggaaattaaaatgcaaattctcagatgatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543 agaccgaccaatacgtcgaaccctatacggaaattaaaatgcaaattctcagatgatgat 2484
Query: 421 gataaagtgtttattacctctgaatttaataacaaaagccgctatgatttatgacatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2483 gataaagtgtttattacctctgaatttaataacaaaagccgctatgatttatgacatgtt 2424
Query: 481 gcacatctaattatatagatatattgcgcacttacttaataattaatttaacatatggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2423 gcacatctaattatatagatatattgcgcacttacttaataattaatttaacatatggaa 2364
Query: 541 accgccttaatattaaaaacggtgatagtttttatattttttgttttatgtacttctttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2363 accgccttaatattaaaaacggtgatagtttttatattttttgttttatgtacttctttg 2304
Query: 601 gaatggtgaccttcatacttccactctcagtaacacagtaatccgcacacagcgcatgaa 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2303 gaatggtgaccttcatacttccactctcagtaacacagtaatccgca-acagcgcatgaa 2245
Query: 661 tagagtgtacaaatctgaactaactccccgaagatatcaatatacctagtaacagaaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 tagagtgtacaaatctgaactaactccccgaagatatcaatatacctagtaacagaaaat 2185
Query: 721 gttgttttacggcactatggccgagtggttaaggcgagagactcgaactaatttgaggga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 gttgttttacggcactatggccgagtggttaaggcgagagactcgaactaatttgaggga 2125
Query: 781 tctcttgggctctg-ccgcgctggttcaaatcctgctggtgtcgttattttttttataaa 839
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 tctcttgggctctgcccgcgctggttcaaatcctgctggtgtcgttattttttttataaa 2065
Query: 840 acatgttcgaaaaaaaagaaaaaacaaaagtgaaa-gcttttaacttagcggattggc-a 897
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
Sbjct: 2064 acatgttcgaaaaaaaagaaaaaacaaaagtgaaacgcttt--acttagcggattggcaa 2007
Query: 898 cgtttaaatcgattccgaaaccatcagtggtgtactgttcgggctctacacgtctcgtgg 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 cgtttaaatcgattccgaaaccatcagtggtgtactgttcgggctctacacgtctcgtgg 1947
Query: 958 atactaatatacccatgcttgctgatagcttttatgc-gttcatttctgcagcccattct 1016
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1946 atactaatatacccatgcttgctgatagcttttatgcagttcatttctgcagcccattct 1887
Query: 1017 cgtcmcgttctaa 1029
|||| ||||||||
Sbjct: 1886 cgtcacgttctaa 1874
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9894
Number of Sequences: 1807
Number of extensions: 9894
Number of successful extensions: 138
Number of sequences better than 1.0e-20: 1
length of query: 1029
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1013
effective length of database: 10,329,639
effective search space: 10463924307
effective search space used: 10463924307
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)